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Practical Guide to ChIP-seq Data Analysis

Aus der Reihe Focus Computational Biology Series
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25,99 € UVP 35,70 €

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Beschreibung

Produktdetails

Einband

Taschenbuch

Erscheinungsdatum

13.12.2021

Abbildungen

10 SW-Abb.

Verlag

Taylor & Francis

Seitenzahl

112

Maße (L/B/H)

21,6/14/0,6 cm

Gewicht

152 g

Sprache

Englisch

ISBN

978-1-03-224176-0

Beschreibung

Rezension

I found the book to be very well structured; the topic is presented following a logical progression, guiding the reader through a ChIP-seq experiment, illustrating each step of the analytical workflow. The workflow is nicely divided in smaller blocks, each including the relevant theory and practical exercises (consisting of code) that enable the reader to put the theory intro practice, plus suggestions for additional reading.

I particularly appreciated the reference to biases and important issues that need to be considered when planning an experiment, as well as the discussion of data quality issues, extremely relevant to users dealing with publicly available data.

This will be a great resource for teaching, particularly given the use of public data as well as open source software. All that is presented in the book is reproducible, making it an extremely useful resource for any learner. I also appreciated the chapter dedicated to downstream analysis and interpretation - great to see as extremely useful and not often covered to the extent required; similar observation for the integration with other data types, a very timely subject of great interest to many researchers working with different data types and in need of combining the results of different experiment types. This book will be useful to different audiences (experimentalists as well as bioinformaticians) and it is written in a way which is easy to understand for non-technical audiences.

-Gabriella Rustici, University of Cambridge 

Produktdetails

Einband

Taschenbuch

Erscheinungsdatum

13.12.2021

Abbildungen

10 SW-Abb.

Verlag

Taylor & Francis

Seitenzahl

112

Maße (L/B/H)

21,6/14/0,6 cm

Gewicht

152 g

Sprache

Englisch

ISBN

978-1-03-224176-0

EU-Ansprechpartner

Taylor & Francis Verlag GmbH
Kaufingerstraße 24
80331 München
DE
GPSR@taylorandfrancis.com

Herstelleradresse

Taylor & Francis Group
5 Howick Place
SW1P 1WG London
UK
GPSR@taylorandfrancis.com

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  • Produktbild: Practical Guide to ChIP-seq Data Analysis
  • Produktbild: Practical Guide to ChIP-seq Data Analysis

  • Chapter 1 Introduction to ChIP-seq

    Chapter 2 Getting Started

    Chapter 3 General Quality Control

    Chapter 4 Genomic Alignment

    Chapter 5 ChIP-seq-specific Quality Control

    Chapter 6 Peak Calling

    Chapter 7 Data visualisation

    Chapter 8 Comparative Analysis

    Chapter 9 Downstream Analyses