Computational Methods in Systems Biology (eBook, PDF)

7th International Conference, CMSB 2009
Redaktion: Degano, Pierpaolo; Gorrieri, Roberto

• Format: PDF

Produktbeschreibung

This book constitutes the refereed proceedings of the 7th International Conference on Computational Methods in Systems Biology, CMSB 2009, held in Bologna, Italy, August 31 - September 1, 2009.

The 18 revised full papers presented together with the summaries of 3 invited papers were carefully reviewed and selected from more than 45 submissions. The papers cover theoretical or applied contributions that are motivated by a biological question focusing on modeling approaches, including process algebra, simulation approaches, analysis methods, in particular model checking and flux analysis, and case studies.

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Produktdetails

• Verlag: Springer Berlin Heidelberg
• Seitenzahl: 329
• Erscheinungstermin: 27. August 2009
• Englisch
• ISBN-13: 9783642038457
• Artikelnr.: 44226903

Inhaltsangabe

Prediction of Protein-Protein Interacting Sites: How to Bridge Molecular Events to Large Scale Protein Interaction Networks.- The Equivalence between Biology and Computation.- BlenX4Bio - BlenX for Biologists.- Modelling Biological Clocks with Bio-PEPA: Stochasticity and Robustness for the Neurospora crassa Circadian Network.- Quantitative Pathway Logic for Computational Biology.- A Prize-Collecting Steiner Tree Approach for Transduction Network Inference.- Formal Analysis of the Genetic Toggle.- Control Strategies for the Regulation of the Eukaryotic Heat Shock Response.- Computing Reachable States for Nonlinear Biological Models.- On Coupling Models Using Model-Checking: Effects of Irinotecan Injections on the Mammalian Cell Cycle.- The ?-Lattice: Decidability Boundaries for Qualitative Analysis in Biological Languages.- Approximation of Event Probabilities in Noisy Cellular Processes.- Equivalence and Discretisation in Bio-PEPA.- Improved Parameter Estimation for Completely Observed Ordinary Differential Equations with Application to Biological Systems.- A Bayesian Approach to Model Checking Biological Systems.- Dynamic Compartments in the Imperative ?-Calculus.- Probabilistic Approximations of Signaling Pathway Dynamics.- A Reduction of Logical Regulatory Graphs Preserving Essential Dynamical Properties.- On the Use of Stochastic Petri Nets in the Analysis of Signal Transduction Pathways for Angiogenesis Process.- CSL Model Checking of Biochemical Networks with Interval Decision Diagrams.- Qualitative Transition Systems for the Abstraction and Comparison of Transient Behavior in Parametrized Dynamic Models.