Computational Statistics in Data Science (eBook, PDF)
Redaktion: Piegorsch, Walter W.; Lee, Thomas C. M.; Zhang, Hao Helen; Levine, Richard A.
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Computational Statistics in Data Science (eBook, PDF)
Redaktion: Piegorsch, Walter W.; Lee, Thomas C. M.; Zhang, Hao Helen; Levine, Richard A.
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An essential roadmap to the application of computational statistics in contemporary data science In Computational Statistics in Data Science, a team of distinguished mathematicians and statisticians delivers an expert compilation of concepts, theories, techniques, and practices in computational statistics for readers who seek a single, standalone sourcebook on statistics in contemporary data science. The book contains multiple sections devoted to key, specific areas in computational statistics, offering modern and accessible presentations of up-to-date techniques. Computational Statistics in…mehr
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- Produktdetails
- Verlag: Jossey-Bass
- Seitenzahl: 672
- Erscheinungstermin: 17. März 2022
- Englisch
- ISBN-13: 9781119561057
- Artikelnr.: 63652749
- Verlag: Jossey-Bass
- Seitenzahl: 672
- Erscheinungstermin: 17. März 2022
- Englisch
- ISBN-13: 9781119561057
- Artikelnr.: 63652749
- Herstellerkennzeichnung Die Herstellerinformationen sind derzeit nicht verfügbar.
87 5 Stopping Rules 88 6 Workflow 89 7 Examples 90 6 Sequential Monte Carlo: Particle Filters and Beyond 99 Adam M. Johansen 1 Introduction 99 2 Sequential Importance Sampling and Resampling 99 3 SMC in Statistical Contexts 106 4 Selected Recent Developments 112 7 Markov Chain Monte Carlo Methods, A Survey with Some Frequent Misunderstandings 119 Christian P. Robert and Wu Changye 1 Introduction 119 2 Monte Carlo Methods 121 3 Markov Chain Monte Carlo Methods 128 4 Approximate Bayesian Computation 141 5 Further Reading 145 8 Bayesian Inference with Adaptive Markov Chain Monte Carlo 151 Matti Vihola 1 Introduction 151 2 Random-Walk Metropolis Algorithm 151 3 Adaptation of Random-Walk Metropolis 152 4 Multimodal Targets with Parallel Tempering 156 5 Dynamic Models with Particle Filters 157 6 Discussion 159 9 Advances in Importance Sampling 165 Víctor Elvira and Luca Martino 1 Introduction and Problem Statement 165 2 Importance Sampling 167 3 Multiple Importance Sampling (MIS) 171 4 Adaptive Importance Sampling (AIS) 174 Part III Statistical Learning 183 10 Supervised Learning 185 Weibin Mo and Yufeng Liu 1 Introduction 185 2 Penalized Empirical Risk Minimization 186 3 Linear Regression 190 4 Classification 193 5 Extensions for Complex Data 200 6 Discussion 203 11 Unsupervised and Semisupervised Learning 209 Jia Li and Vincent A. Pisztora 1 Introduction 209 2 Unsupervised Learning 210 3 Semisupervised Learning 219 4 Conclusions 224 12 Random Forest 231 Peter Calhoun, Xiaogang Su, Kelly M. Spoon, Richard A. Levine, and Juanjuan Fan 1 Introduction 231 2 Random Forest (RF) 232 3 Random Forest Extensions 235 4 Random Forests of Interaction Trees (RFIT) 239 5 Random Forest of Interaction Trees for Observational Studies 243 6 Discussion 249 13 Network Analysis 253 Rong Ma and Hongzhe Li 1 Introduction 253 2 Gaussian Graphical Models for Mixed Partial Compositional Data 255 3 Theoretical Properties 257 4 Graphical Model Selection 260 5 Analysis of a Microbiome-Metabolomics Data 260 6 Discussion 261 14 Tensors in Modern Statistical Learning 269 Will Wei Sun, Botao Hao, and Lexin Li 1 Introduction 269 2 Background270 3 Tensor Supervised Learning 272 4 Tensor Unsupervised Learning 276 5 Tensor Reinforcement Learning 282 6 Tensor Deep Learning 286 15 Computational Approaches to Bayesian Additive Regression Trees 297 Hugh Chipman, Edward George, Richard Hahn, Robert McCulloch, Matthew Pratola, and Rodney Sparapani 1 Introduction 297 2 Bayesian CART 298 3 TreeMCMC302 4 The BART Model 308 5 BART Example: Boston Housing Values and Air Pollution 310 6 BARTMCMC311 7 BART Extentions 313 8 Conclusion 320 Part IV High-Dimensional Data Analysis 323 16 Penalized Regression 325 Seung Jun Shin and Yichao Wu 1 Introduction 325 2 Penalization for Smoothness 326 3 Penalization for Sparsity 328 4 Tuning Parameter Selection 330 17 Model Selection in High-Dimensional Regression 333 Hao H. Zhang 1 Model Selection Problem 333 2 Model Selection in High-Dimensional Linear Regression 335 3 Interaction-Effect Selection for High-Dimensional Data 339 4 Model Selection in High-Dimensional Nonparametric Models 342 5 Concluding Remarks 349 18 Sampling Local Scale Parameters in High-Dimensional Regression Models 355 Anirban Bhattacharya and James E. Johndrow 1 Introduction 355 2 A Blocked Gibbs Sampler for the Horseshoe 356 3 Sampling (
,
2,
) 359 4 Sampling
360 5 Appendix: A. Newton-Raphson Steps for the Inverse-cdf Sampler for
367 19 Factor Modeling for High-Dimensional Time Series 371 Chun Yip Yau 1 Introduction 371 2 Identifiability 372 3 Estimation of High-Dimensional Factor Model 373 4 Determining the Number of Factors 383 Part V Quantitative Visualization 387 20 Visual Communication of Data: It Is Not a Programming Problem, It Is Viewer Perception 389 Edward Mulrow and Nola du Toit 1 Introduction 389 2 Case Studies Part 1 391 3 Let StAR Be Your Guide 393 4 Case Studies Part 2: Using StAR Principles to Develop Better Graphics 394 5 Ask Colleagues Their Opinion 397 6 Case Studies: Part 3 398 7 Iterate 401 8 Final Thoughts 402 21 Uncertainty Visualization 405 Lace Padilla, Matthew Kay, and Jessica Hullman 1 Introduction 405 2 Uncertainty Visualization Theories 408 3 General Discussion 420 22 Big Data Visualization 427 Leland Wilkinson 1 Introduction 427 2 Architecture for Big Data Analytics 428 3 Filtering430 4 Aggregating 430 5 Analyzing 436 6 Big Data Graphics 436 7 Conclusion 440 23 Visualization-Assisted Statistical Learning 443 Catherine B. Hurley and Katarina Domijan 1 Introduction 443 2 Better Visualizations with Seriation 444 3 Visualizing Machine Learning Fits 445 4 Condvis2 Case Studies 447 5 Discussion 453 24 Functional Data Visualization 457 Marc G. Genton and Ying Sun 1 Introduction 457 2 Univariate Functional Data Visualization 458 3 Multivariate Functional Data Visualization 461 4 Conclusions 465 Part VI Numerical Approximation and Optimization 469 25 Gradient-Based Optimizers for Statistics and Machine Learning 471 Cho-Jui Hsieh 1 Introduction 471 2 Convex Versus Nonconvex Optimization 472 3 Gradient Descent 473 4 Proximal Gradient Descent: Handling Nondifferentiable Regularization 475 5 Stochastic Gradient Descent 476 26 Alternating Minimization Algorithms 481 David R. Hunter 1 Introduction 481 2 Coordinate Descent 482 3 EM as Alternating Minimization 484 3.1 Finite Mixture Models 485 4 Matrix Approximation Algorithms 486 5 Conclusion 489 27 A Gentle Introduction to Alternating Direction Method of Multipliers (ADMM) for Statistical Problems 493 Shiqian Ma and Mingyi Hong 1 Introduction 493 2 Two Perfect Examples of ADMM 494 3 Variable Splitting and Linearized ADMM 496 4 Multiblock ADMM 499 5 Nonconvex Problems 501 6 Stopping Criteria 502 7 Convergence Results of ADMM 502 28 Nonconvex Optimization via MM Algorithms: Convergence Theory 509 Kenneth Lange, Joong-Ho Won, Alfonso Landeros, and Hua Zhou 1 Background509 2 Convergence Theorems 510 3 Paracontraction 521 4 Bregman Majorization 523 Part VII High-Performance Computing 535 29 Massive Parallelization 537 Robert B. Gramacy 1 Introduction 537 2 Gaussian Process Regression and Surrogate Modeling 539 3 Divide-and-Conquer GP Regression 542 4 Empirical Results 548 5 Conclusion 552 30 Divide-and-Conquer Methods for Big Data Analysis 559 Xueying Chen, Jerry Q. Cheng, and Min-ge Xie 1 Introduction 559 2 Linear Regression Model 560 3 Parametric Models 561 4 Nonparametric and Semiparametric Models 567 5 Online Sequential Updating 568 6 Splitting the Number of Covariates 569 7 Bayesian Divide-and-Conquer and Median-Based Combining 570 8 Real-World Applications 571 9 Discussion 572 31 Bayesian Aggregation 577 Yuling Yao 1 From Model Selection to Model Combination 577 2 From Bayesian Model Averaging to Bayesian Stacking 580 3 Asymptotic Theories of Stacking 584 4 Stacking in Practice 586 5 Discussion 588 32 Asynchronous Parallel Computing 593 Ming Yan 1 Introduction 593 2 Asynchronous Parallel Coordinate Update 597 3 Asynchronous Parallel Stochastic Approaches 602 4 Doubly Stochastic Coordinate Optimization with Variance Reduction 604 5 Concluding Remarks 605
87 5 Stopping Rules 88 6 Workflow 89 7 Examples 90 6 Sequential Monte Carlo: Particle Filters and Beyond 99 Adam M. Johansen 1 Introduction 99 2 Sequential Importance Sampling and Resampling 99 3 SMC in Statistical Contexts 106 4 Selected Recent Developments 112 7 Markov Chain Monte Carlo Methods, A Survey with Some Frequent Misunderstandings 119 Christian P. Robert and Wu Changye 1 Introduction 119 2 Monte Carlo Methods 121 3 Markov Chain Monte Carlo Methods 128 4 Approximate Bayesian Computation 141 5 Further Reading 145 8 Bayesian Inference with Adaptive Markov Chain Monte Carlo 151 Matti Vihola 1 Introduction 151 2 Random-Walk Metropolis Algorithm 151 3 Adaptation of Random-Walk Metropolis 152 4 Multimodal Targets with Parallel Tempering 156 5 Dynamic Models with Particle Filters 157 6 Discussion 159 9 Advances in Importance Sampling 165 Víctor Elvira and Luca Martino 1 Introduction and Problem Statement 165 2 Importance Sampling 167 3 Multiple Importance Sampling (MIS) 171 4 Adaptive Importance Sampling (AIS) 174 Part III Statistical Learning 183 10 Supervised Learning 185 Weibin Mo and Yufeng Liu 1 Introduction 185 2 Penalized Empirical Risk Minimization 186 3 Linear Regression 190 4 Classification 193 5 Extensions for Complex Data 200 6 Discussion 203 11 Unsupervised and Semisupervised Learning 209 Jia Li and Vincent A. Pisztora 1 Introduction 209 2 Unsupervised Learning 210 3 Semisupervised Learning 219 4 Conclusions 224 12 Random Forest 231 Peter Calhoun, Xiaogang Su, Kelly M. Spoon, Richard A. Levine, and Juanjuan Fan 1 Introduction 231 2 Random Forest (RF) 232 3 Random Forest Extensions 235 4 Random Forests of Interaction Trees (RFIT) 239 5 Random Forest of Interaction Trees for Observational Studies 243 6 Discussion 249 13 Network Analysis 253 Rong Ma and Hongzhe Li 1 Introduction 253 2 Gaussian Graphical Models for Mixed Partial Compositional Data 255 3 Theoretical Properties 257 4 Graphical Model Selection 260 5 Analysis of a Microbiome-Metabolomics Data 260 6 Discussion 261 14 Tensors in Modern Statistical Learning 269 Will Wei Sun, Botao Hao, and Lexin Li 1 Introduction 269 2 Background270 3 Tensor Supervised Learning 272 4 Tensor Unsupervised Learning 276 5 Tensor Reinforcement Learning 282 6 Tensor Deep Learning 286 15 Computational Approaches to Bayesian Additive Regression Trees 297 Hugh Chipman, Edward George, Richard Hahn, Robert McCulloch, Matthew Pratola, and Rodney Sparapani 1 Introduction 297 2 Bayesian CART 298 3 TreeMCMC302 4 The BART Model 308 5 BART Example: Boston Housing Values and Air Pollution 310 6 BARTMCMC311 7 BART Extentions 313 8 Conclusion 320 Part IV High-Dimensional Data Analysis 323 16 Penalized Regression 325 Seung Jun Shin and Yichao Wu 1 Introduction 325 2 Penalization for Smoothness 326 3 Penalization for Sparsity 328 4 Tuning Parameter Selection 330 17 Model Selection in High-Dimensional Regression 333 Hao H. Zhang 1 Model Selection Problem 333 2 Model Selection in High-Dimensional Linear Regression 335 3 Interaction-Effect Selection for High-Dimensional Data 339 4 Model Selection in High-Dimensional Nonparametric Models 342 5 Concluding Remarks 349 18 Sampling Local Scale Parameters in High-Dimensional Regression Models 355 Anirban Bhattacharya and James E. Johndrow 1 Introduction 355 2 A Blocked Gibbs Sampler for the Horseshoe 356 3 Sampling (
,
2,
) 359 4 Sampling
360 5 Appendix: A. Newton-Raphson Steps for the Inverse-cdf Sampler for
367 19 Factor Modeling for High-Dimensional Time Series 371 Chun Yip Yau 1 Introduction 371 2 Identifiability 372 3 Estimation of High-Dimensional Factor Model 373 4 Determining the Number of Factors 383 Part V Quantitative Visualization 387 20 Visual Communication of Data: It Is Not a Programming Problem, It Is Viewer Perception 389 Edward Mulrow and Nola du Toit 1 Introduction 389 2 Case Studies Part 1 391 3 Let StAR Be Your Guide 393 4 Case Studies Part 2: Using StAR Principles to Develop Better Graphics 394 5 Ask Colleagues Their Opinion 397 6 Case Studies: Part 3 398 7 Iterate 401 8 Final Thoughts 402 21 Uncertainty Visualization 405 Lace Padilla, Matthew Kay, and Jessica Hullman 1 Introduction 405 2 Uncertainty Visualization Theories 408 3 General Discussion 420 22 Big Data Visualization 427 Leland Wilkinson 1 Introduction 427 2 Architecture for Big Data Analytics 428 3 Filtering430 4 Aggregating 430 5 Analyzing 436 6 Big Data Graphics 436 7 Conclusion 440 23 Visualization-Assisted Statistical Learning 443 Catherine B. Hurley and Katarina Domijan 1 Introduction 443 2 Better Visualizations with Seriation 444 3 Visualizing Machine Learning Fits 445 4 Condvis2 Case Studies 447 5 Discussion 453 24 Functional Data Visualization 457 Marc G. Genton and Ying Sun 1 Introduction 457 2 Univariate Functional Data Visualization 458 3 Multivariate Functional Data Visualization 461 4 Conclusions 465 Part VI Numerical Approximation and Optimization 469 25 Gradient-Based Optimizers for Statistics and Machine Learning 471 Cho-Jui Hsieh 1 Introduction 471 2 Convex Versus Nonconvex Optimization 472 3 Gradient Descent 473 4 Proximal Gradient Descent: Handling Nondifferentiable Regularization 475 5 Stochastic Gradient Descent 476 26 Alternating Minimization Algorithms 481 David R. Hunter 1 Introduction 481 2 Coordinate Descent 482 3 EM as Alternating Minimization 484 3.1 Finite Mixture Models 485 4 Matrix Approximation Algorithms 486 5 Conclusion 489 27 A Gentle Introduction to Alternating Direction Method of Multipliers (ADMM) for Statistical Problems 493 Shiqian Ma and Mingyi Hong 1 Introduction 493 2 Two Perfect Examples of ADMM 494 3 Variable Splitting and Linearized ADMM 496 4 Multiblock ADMM 499 5 Nonconvex Problems 501 6 Stopping Criteria 502 7 Convergence Results of ADMM 502 28 Nonconvex Optimization via MM Algorithms: Convergence Theory 509 Kenneth Lange, Joong-Ho Won, Alfonso Landeros, and Hua Zhou 1 Background509 2 Convergence Theorems 510 3 Paracontraction 521 4 Bregman Majorization 523 Part VII High-Performance Computing 535 29 Massive Parallelization 537 Robert B. Gramacy 1 Introduction 537 2 Gaussian Process Regression and Surrogate Modeling 539 3 Divide-and-Conquer GP Regression 542 4 Empirical Results 548 5 Conclusion 552 30 Divide-and-Conquer Methods for Big Data Analysis 559 Xueying Chen, Jerry Q. Cheng, and Min-ge Xie 1 Introduction 559 2 Linear Regression Model 560 3 Parametric Models 561 4 Nonparametric and Semiparametric Models 567 5 Online Sequential Updating 568 6 Splitting the Number of Covariates 569 7 Bayesian Divide-and-Conquer and Median-Based Combining 570 8 Real-World Applications 571 9 Discussion 572 31 Bayesian Aggregation 577 Yuling Yao 1 From Model Selection to Model Combination 577 2 From Bayesian Model Averaging to Bayesian Stacking 580 3 Asymptotic Theories of Stacking 584 4 Stacking in Practice 586 5 Discussion 588 32 Asynchronous Parallel Computing 593 Ming Yan 1 Introduction 593 2 Asynchronous Parallel Coordinate Update 597 3 Asynchronous Parallel Stochastic Approaches 602 4 Doubly Stochastic Coordinate Optimization with Variance Reduction 604 5 Concluding Remarks 605