MVK Karthik, Pratyoosh Shukla

Computational Strategies Towards Improved Protein Function Prophecy of Xylanases from Thermomyces lanuginosus (eBook, PDF)

• Format: PDF

Produktbeschreibung

This Brief reports on the interplay of an amino-acid mutation towards substrate which could lead to enhanced effects on mutant. These effects need to be given consideration in the engineering processes of protein stability and further exploration of such learning are required to provide novel indication for selection of an enzymes. There are very few reports showing such stable, energy efficient model towards improved protein function prediction screening in-silico structure based mutagenesis of xylanases from Thermomyces lanuginosus

Produktdetails

• Verlag: Springer New York
• Erscheinungstermin: 13. Juli 2012
• Englisch
• ISBN-13: 9781461447238
• Artikelnr.: 37788964

Inhaltsangabe

Introduction.- Material and Methods.- Selection of sequences, 3D structures and multiple sequence alignment.- Mutant generation.- Energy minimization.- Stereo-chemical quality check and analysis of non-bonded interactions.- Protein-protein docking.- InterProScan.- Identification of functionally important regions of wild type viz. Endo-1, 4-beta xylanases (1YNA).- 3d2GO server: From protein 3D structure to Gene Ontology (GO) term.- Results and discussions.- Conclusion.

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Introduction.- Material and Methods.- Selection of sequences, 3D structures and multiple sequence alignment.- Mutant generation.- Energy minimization.- Stereo-chemical quality check and analysis of non-bonded interactions.- Protein-protein docking.- InterProScan.- Identification of functionally important regions of wild type viz. Endo-1, 4-beta xylanases (1YNA).- 3d2GO server: From protein 3D structure to Gene Ontology (GO) term.- Results and discussions.- Conclusion.