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This book is a collection of up-to-date, detailed protocols for physical chromosome mapping and their applications for studying genome organization and evolution in Insects and related Arthropod species. There is a need for such a book to understand the results being produced by the i5K project, which is collecting whole-genome sequences for 5,000 insect and related arthropod species. These results are often collections of unassembled contigs and supercontigs. This book provides cytogeneticists with the necessary background and protocols to understand and assemble chromosome-based genome assemblies from such whole-genome sequence data.
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